Insertion junction: CLIP2.032477_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.032477
Chromosome:chromosome 2
Location:4062156
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g103200 (1 of 7) PF00211//PF13416 - Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc) // Bacterial extracellular solute-binding protein (SBP_bac_8) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGACAACGTGACACATTGTATCTCCTCAACGTGACCTCTTGAACTGC
Internal bar code:AAGGTGGCGGGCATTATTCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:718
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGTGTGCTGGACCCATC
Suggested primer 2:GCTATGTCTTTTCGCGGCAG