Insertion junction: CLIP2.032491_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.032491
Chromosome:chromosome 17
Location:5692375
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g740430 (1 of 1) IPR003663//IPR005828//IPR011701//IPR020846 - Sugar/inositol transporter // Major facilitator, sugar transporter-like // Major facilitator superfamily // Major facilitator superfamily domain intron
Cre17.g802121 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCGGAGGCCCTGGACGCCATCGGCACCAAACACAACCTCCGCAAAAA
Internal bar code:AGGAATCTTGGGATGCGGATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1393
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GAACTCCACGAACTGCTCCA
Suggested primer 2:TACCAAAAGCCACAAAGCGC