Insertion junction: CLIP2.032499_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032499
Chromosome:chromosome 6
Location:791816
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g255050 (1 of 1) PTHR24188:SF44 - E3 UBIQUITIN-PROTEIN LIGASE XBAT35-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGATACACACAGGTCACGCCACGTCAGCCCCCAAACCCGCCCCTGGCG
Internal bar code:ATTAGGATTTTCGCCGCGGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2998
LEAP-Seq percent confirming:98.1481
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTAGCTCTTCATCCCCCA
Suggested primer 2:TAGTAGTAGGAGCCGGTGGG