Insertion junction: CLIP2.032502_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.032502
Chromosome:chromosome 8
Location:3211632
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g376740 (1 of 1) IPR008979//IPR018392 - Galactose-binding domain-like // LysM domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCGTATCCCCCTGCTGTACCGAAGCACCGCCACCAGAGGCCGCCGGC
Internal bar code:ACCGTGAATGAGGAGGGAGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3685
LEAP-Seq percent confirming:99.2806
LEAP-Seq n confirming:138
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:139

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCCCAAGATGCCTCTGT
Suggested primer 2:GCATCATGGGGAGTAGAGGC