Insertion junction: CLIP2.032505_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.032505
Chromosome:chromosome 10
Location:59832
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g417850 (1 of 1) IPR003613//IPR011047 - U box domain // Quinonprotein alcohol dehydrogenase-like superfamily CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCCTGAGGCAGCTGAGGCGCACGCAGGGTCCCATGGTATGAGCGCTC
Internal bar code:CGCAAAGAGCGTCAGGATATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2834
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCTTGGCGGTCCTTGTGT
Suggested primer 2:GCCCGTGTCTCCTCATCAAA