Insertion junction: CLIP2.032510_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.032510
Chromosome:chromosome 6
Location:3237050
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g277000 (1 of 1) PTHR22883//PTHR22883:SF92 - ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN // PROTEIN S-ACYLTRANSFERASE 16-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGCCCACAATGCTGTGCCGGTCCCGCACAGGACCACCACTGTCCGTG
Internal bar code:CGTTGAGACCTGTACTGTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:549
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAGGAGAGAGAGGGTGG
Suggested primer 2:GGACTCTGGGGGTACTGGAT