Insertion junction: CLIP2.032525_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.032525
Chromosome:chromosome 8
Location:2371418
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g371600 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTAGGGCCCCCCCACACACAGCAGTGGATACGGTGCTGTATGAGAGTGA
Internal bar code:AAGGCCCTCGACAGGGATGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1402
LEAP-Seq percent confirming:87.8049
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGACGGGCTGTTCACACC
Suggested primer 2:TCTGGAAGGTCTGCAAGCAG