Insertion junction: CLIP2.032531_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.032531
Chromosome:chromosome 3
Location:3925021
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171050 GHL1 (1 of 2) 3.2.1.21 - Beta-glucosidase / Gentobiase; Glycosyl hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGTGTTTATGTCGGCATTGCGCTGGCGCATGGTGTGGCGGGGCGACGG
Internal bar code:AAGGCTGTAAAAACTGGGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1696
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCTTTGGCGTTGACAAG
Suggested primer 2:CCCCAAACTCCCCATGTCTC