Insertion junction: CLIP2.032538_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.032538
Chromosome:chromosome 10
Location:4204329
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g449200 ANK5 (1 of 1) PTHR22849//PTHR24133//PTHR24133:SF23 - WDSAM1 PROTEIN // FAMILY NOT NAMED // SUBFAMILY NOT NAMED; Predicted protein with ankyrin repeats 5'UTR
Cre10.g449250 KAP1,FLA3 Kinesin II Associated Protein 1; (1 of 1) PTHR15605:SF2 - KINESIN-ASSOCIATED PROTEIN 3 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAAGCAAGCGGGCCTAGGGTCTACAAGCGCAGCTGTCTAAATAGCGTA
Internal bar code:ACGAAACGGACCGATAGTAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2070
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCTCGCAATTCAGGCTT
Suggested primer 2:TGAACATGCAACGCCCTACT