Insertion junction: CLIP2.032549_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.032549
Chromosome:chromosome 17
Location:1035146
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g703400 (1 of 3) PTHR11207//PTHR11207:SF7 - RIBONUCLEASE III // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCGCCGGCGCCTCGGCCGGCGGCGGCGCTACGGGCCGTAGTGGCTGC
Internal bar code:GAGGCTCACTGCTTGGACGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:925
LEAP-Seq percent confirming:75.7576
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TTATGCGCCCCTGTTCCAAT
Suggested primer 2:GTATACTCTGGGTCTGCCGC