Insertion junction: CLIP2.032557_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.032557
Chromosome:chromosome 9
Location:2454119
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393300 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCTCCGCCGCCAGTGCGCTGGCCCCCGCCTCCACATACACCAGGTAG
Internal bar code:AGTGGTAGAGTTAGCAGACACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1293
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGGAGTTCCACGTCAT
Suggested primer 2:GGTTGTACACCAGCGACTGA