Insertion junction: CLIP2.032589_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.032589
Chromosome:chromosome 1
Location:3309074
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021300 (1 of 2) IPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGACCTGCTGGAGCAGGTAGGAGCCGGCACTCCTGCTGGGCGCGTGTG
Internal bar code:AGAAAATATATGGTTTATAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2542
LEAP-Seq percent confirming:64.2105
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGTGTTTTATCGGCATGC
Suggested primer 2:GCAGCAAGACAACCTGAACG