Insertion junction: CLIP2.032590_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.032590
Chromosome:chromosome 17
Location:1862624
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g709500 (1 of 52) 2.7.11.22 - Cyclin-dependent kinase / Cdk-activating protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATCCTGTCACCCGATGCAGTACACCTACATCCAGCTGCTCGGCCGCGG
Internal bar code:TCATTCTGATTACTGGTGAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2928
LEAP-Seq percent confirming:94.5455
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAAAACCCGCACACACG
Suggested primer 2:TGCAAGCATCCATTGGCCTA