Insertion junction: CLIP2.032592_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.032592
Chromosome:chromosome 12
Location:3158100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500450 TPD1 (1 of 2) PTHR12121:SF37 - 2',5'-PHOSPHODIESTERASE 12; 2'%252C5'-phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCCCCCCTGAACCCCGACCTGCCTGCGCCCCAAGGCGTCAGACGCGG
Internal bar code:AGCCGTTGCGTGGTGTGTTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:534
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GACGTTACCCGCTAGGCTAC
Suggested primer 2:CGGTCGATGGAGATCTGCAA