Insertion junction: CLIP2.032597_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.032597
Chromosome:chromosome 5
Location:1154342
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g248500 TRXO,TRXO1,TRX15 Thioredoxin o, mitochondrial; (1 of 1) PTHR10438//PTHR10438:SF275 - THIOREDOXIN // THIOREDOXIN O1, MITOCHONDRIAL-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGAAGACGCGGACACGCGCCGAAGAGCAAGCACTGGACTCCTGCCCTG
Internal bar code:AAATTCGATTTAATCGCAACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3590
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:120
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:120

Suggested primers for confirmation by PCR

Suggested primer 1:GTTATACTTGGCGCGGCTTG
Suggested primer 2:GCTGTGGGATAAACGGAGCT