Insertion junction: CLIP2.032599_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032599
Chromosome:chromosome 1
Location:4340434
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g029450 (1 of 1) K09272 - structure-specific recognition protein 1 (SSRP1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGACGGACTAGCAGCTGGCGGGCCTTCTCATGGTATGACTTGCGCCC
Internal bar code:AGAAGGGGTGCTCATGTCAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2817
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGCTTTGCACCTCACTA
Suggested primer 2:GACAAGGTCAAGGCCGAGAA