Insertion junction: CLIP2.032601_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.032601
Chromosome:chromosome 12
Location:3389738
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498000 (1 of 100) IPR001810 - F-box domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTATAGATAGATAGGCCAACCCTGGAGAAGTGCACACAACAAAACACAC
Internal bar code:CATTCGGGTATAGGAATAGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1994
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GACATCCACCTAGCTACCGC
Suggested primer 2:CATGTGTTCTCGCTCCAGGT