Insertion junction: CLIP2.032606_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032606
Chromosome:chromosome 17
Location:3405849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g723300 (1 of 18) K08824 - cyclin-dependent kinase-like [EC:2.7.11.22] (CDKL) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCACGCTGCGGCAGCGGCTGCCGCCGGGGCTGAGCGCGGGCGTGGTGGA
Internal bar code:GGGGAACCTCGTTGCGTTTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:5011
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAAGCACCGTTTGGCATG
Suggested primer 2:GGGTGTGGAACGATGAGGTT