Insertion junction: CLIP2.032607_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032607
Chromosome:chromosome 6
Location:5924748
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g289900 HEN2 (1 of 24) PTHR10641 - MYB-LIKE DNA-BINDING PROTEIN MYB; Hua Enhancer 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAACCAAACCCTTAGGGGAGGGGGAGGGATTTATGTGTGCATACAGCTA
Internal bar code:ATCTTTTGTCACGTATCACGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3092
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGCTTATCTGTGCATGTG
Suggested primer 2:TAGTATGGGGGCTTGCACTC