Insertion junction: CLIP2.032607_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.032607
Chromosome:chromosome 6
Location:5924750
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g289900 HEN2 (1 of 24) PTHR10641 - MYB-LIKE DNA-BINDING PROTEIN MYB; Hua Enhancer 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGTATCCACCCCGTCCCCTGCTGCCCTCCCACCGCAGGCACAGCACAC
Internal bar code:CTTTTGGAAGATTGCAATCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4624
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TAGTATGGGGGCTTGCACTC
Suggested primer 2:GCGGCTTATCTGTGCATGTG