Insertion junction: CLIP2.032608_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.032608
Chromosome:chromosome 9
Location:2523892
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392850 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGTGCCGGGCCGCCCACAGTCGCGCCGTCGCTGGCTGACCCGCCCCAC
Internal bar code:TTTTTCGTACTACTAGTTATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2108
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTACCTCGACCTCATGCC
Suggested primer 2:GCCGACATGCTGTTGAATCC