Insertion junction: CLIP2.032611_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.032611
Chromosome:chromosome 1
Location:4356568
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g029550 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCGGCGGCGGCGCAGCTGGGTGGCCTGGCGCCAGGGCCACTGCAGGG
Internal bar code:CCTAAGAACGGCTGAGAGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:494
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTGGATAAATGCGCCTG
Suggested primer 2:CGTGATGGAGGAGACGATGG