Insertion junction: CLIP2.032612_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.032612
Chromosome:chromosome 1
Location:4175574
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g027950 IFT74,CMG1,IFT71,IFT72 (1 of 1) PTHR31432:SF0 - INTRAFLAGELLAR TRANSPORT PROTEIN 74 HOMOLOG; Intraflagellar transport protein 74/72 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTCAAACCTATTCCCACCACCGGCCCTGTGACTCACGCTGCCGAACTC
Internal bar code:TGTGTGGAACGAGGGTTTGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1123
LEAP-Seq percent confirming:78.0488
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GGTACGGTTCCTTGCAGTCA
Suggested primer 2:TACACCACGGCCTTCTTGAC