Insertion junction: CLIP2.032614_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032614
Chromosome:chromosome 7
Location:1779746
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g800785 (1 of 5) PTHR30405 - TRANSPOSASE gene_edge/mRNA_edge/CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGCCGGTGTTGTCTGGTTAGCGACCTGTGCTGACGAGGATGGCGTAG
Internal bar code:GCGATACCTCAAACTGAAGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4653
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCCGCTATCATCGTGACA
Suggested primer 2:CCACTCACCTTCACCCACTC