Insertion junction: CLIP2.032617_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.032617
Chromosome:chromosome 6
Location:4091208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278226 (1 of 6) PTHR31942//PTHR31942:SF1 - FAMILY NOT NAMED // MLO-LIKE PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTTTGGCCGCTCTCACATGTCCTTGATGGTGAAGGCGTAGGCGATGAA
Internal bar code:AGCGACGGTCATTTAGGCTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1302
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCACATTGTTGCCTTCAC
Suggested primer 2:GTGCCGCGTATACATGCAAG