Insertion junction: CLIP2.032623_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032623
Chromosome:chromosome 8
Location:455806
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358900 (1 of 3) 2.4.2.8 - Hypoxanthine phosphoribosyltransferase / Transphosphoribosidase CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCGTGTACTCGGCCTCCATGGGCACGCGTCGCCGCGCCTTCTTGTCC
Internal bar code:TTGTTGTCACCGGAGGCTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:479
LEAP-Seq percent confirming:87.8049
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:ACACTCACACATACGCACGT
Suggested primer 2:AGACTGCCGTTCCTAGCCTA