Insertion junction: CLIP2.032632_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.032632
Chromosome:chromosome 1
Location:4779715
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g033150 (1 of 2) PTHR31385//PTHR31385:SF1 - FAMILY NOT NAMED // EXPRESSED PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTATCCCGTTACCTAGATGTGTGTTAGTAGCCGCTGCCTTGGCATCAC
Internal bar code:TGTTATGGAGGGTGTAACCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1760
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGAACTGGGTTGGGAGAG
Suggested primer 2:ACGGGCTATCTGATAAGCGC