Insertion junction: CLIP2.032642_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.032642
Chromosome:chromosome 3
Location:3346330
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166150 (1 of 1) IPR015077 - Domain of unknown function DUF1858 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCTGGCGCCGCCGGTGCCGTGGTCCGCGGGGTCATCGGAGCGGTTGAC
Internal bar code:ATTCGTCGCACTCGTGTAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1200
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCCTTGTGTTCTTGCTTG
Suggested primer 2:CCCCTCCACTGCTAACACAG