Insertion junction: CLIP2.032656_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.032656
Chromosome:chromosome 2
Location:974560
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00054624

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGACGCCTCAGGTCTAAAATGCACATACATTATGCTGCAAAACTCACAA
Internal bar code:CTATGAGCGGATTATCCATCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3877
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGAATATGGCGCATGCA
Suggested primer 2:ACATGCTCGAGGCTTCCAAA