Insertion junction: CLIP2.032658_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032658
Chromosome:chromosome 11
Location:2513067
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095104 (1 of 1) K15193 - protein SPT2 (SPTY2D1, SPT2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACCACGCAGGCGGCCACTAAGCAAGCTGTTGGAGCTTCAAGTTTCAGA
Internal bar code:TTGGAAGATAGCCCTGCTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5055
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CACATTGAAGCGGTGGCAAA
Suggested primer 2:GGGTTTGGGCTTTGGTACCT