Insertion junction: CLIP2.032667_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.032667
Chromosome:chromosome 4
Location:1968960
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218900 (1 of 2) PTHR10887//PTHR10887:SF333//PTHR13779//PTHR13779:SF20 - DNA2/NAM7 HELICASE FAMILY // SUBFAMILY NOT NAMED // HOLLIDAY JUNCTION DNA HELICASE RUVB-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCAAAACAACGAGTTCGACCCAGATCGCATAAACAGCAGACCGGGCCG
Internal bar code:TAGGCAATTAGCCAGGTTTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:5902
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGGAGTTATACTGGACGG
Suggested primer 2:CTACAAGGACAGCACGTCGT