Insertion junction: CLIP2.032668_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.032668
Chromosome:chromosome 3
Location:809398
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146267 (1 of 2) IPR000571//IPR002110//IPR020683 - Zinc finger, CCCH-type // Ankyrin repeat // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACATGCGGAACTCGTCCGTGCTGTACTCCGGCCGCGTCAGGTCCGACG
Internal bar code:GGGATAGGCAACTACCAGAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:574
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGAAAAGTCCAGACGGAA
Suggested primer 2:TTCTGCAGCTGGTGTTGTTG