Insertion junction: CLIP2.032678_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.032678
Chromosome:chromosome 13
Location:2058028
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576800 PHX21,HIF1,HIF (1 of 1) K09592 - hypoxia-inducible factor prolyl hydroxylase (EGLN, HPH); Cytosolic prolyl 4-hydroxylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGACGATTGACAGGTTGCGGGTGGCACCGACACGCCCAGTCTGCCAAC
Internal bar code:TGGCTCCCGTTATGGGCCAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:695
LEAP-Seq percent confirming:91.1765
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGGCCGGACGAAGCTATG
Suggested primer 2:AAACCACTGCCAACCCAGAA