Insertion junction: CLIP2.032683_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.032683
Chromosome:chromosome 3
Location:3151116
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164850 (1 of 5) PF13391 - HNH endonuclease (HNH_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATGTGTAAAAGTCTATGGTGGAGGGGGAGATTACTGGGCCTCATGGCT
Internal bar code:TGAATCGGATGCGAGTGTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1827
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTTCCACGTGATGTCCA
Suggested primer 2:ATGTGCGATACGGCCCTAAG