Insertion junction: CLIP2.032687_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.032687
Chromosome:chromosome 7
Location:6391954
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g357550 (1 of 3) K06236 - collagen, type I/II/III/V/XI/XXIV/XXVII, alpha (COL1AS) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCGAGGAGGGTGGAGCGGACCCTGGGGCTTCAGCAACAGCTGGTGCT
Internal bar code:GTACTGGCTTCGTGTCTTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1876
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTCGTCAAGGCCATCACC
Suggested primer 2:TCAAACGCCTGGTGTCTCTC