Insertion junction: CLIP2.032689_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.032689
Chromosome:chromosome 10
Location:4756516
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g452600 (1 of 1) PTHR33911:SF1 - RRNA-PROCESSING PROTEIN EFG1 gene_edge/mRNA_edge/5'UTR
Cre10.g452650 TIM17 Mitochondrial inner membrane translocase subunit; (1 of 1) K17795 - mitochondrial import inner membrane translocase subunit TIM17 (TIM17) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACGCTTCCCAGTGGGGTGGGAGTCTGTGCCACGCATACCCCCCGCGTG
Internal bar code:GTGGGGCGCAAGTAGCCGGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:853
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCCAGCCCCCATCTTGTG
Suggested primer 2:TTTTGTGACGAAGCAGCTGC