Insertion junction: CLIP2.032699_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032699
Chromosome:chromosome 3
Location:1501438
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g151550 (1 of 1) IPR000104//IPR029060 - Antifreeze protein, type I // PIN domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGATGATGGGAATTCCTGTTTGGGCCCGGGCACATACCCCCACCGCAA
Internal bar code:ACTAGCTAGTGATACGATAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:388
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGCACACAAATCCGTTGCTT
Suggested primer 2:ACAGCAGCAACAACAGCAAG