Insertion junction: CLIP2.032705_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.032705
Chromosome:chromosome 3
Location:4519118
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175926 5'UTR
Cre03.g800333 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCCGGATATCCGTTTGTAGCTTATCCAGGTAACACTCATAATAGGGTA
Internal bar code:TAGATAATCTCGTTTTCTTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:154
LEAP-Seq percent confirming:26.3158
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCAAACCAGGAGCAGG
Suggested primer 2:CCTCCCAGCCCTGATCCG