Insertion junction: CLIP2.032705_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032705
Chromosome:chromosome 3
Location:4519124
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175926 5'UTR
Cre03.g800333 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCCGGGTTAGGCGGCAGCGGCGGATCAGGGCTGGGAGGCGCAGGCGGC
Internal bar code:CGGTAATGGACGCTTTTGGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2497
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCCAGCCCTGATCCG
Suggested primer 2:GAGGCAAACCAGGAGCAGG