Insertion junction: CLIP2.032708_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.032708
Chromosome:chromosome 5
Location:2964791
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g230600 UVR8 Ultraviolet-B receptor 8; (1 of 1) PTHR22870//PTHR22870:SF193 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGCATCGCCGCATTAACCGATGCGGGCGTTGACGCTGTGGTGTGCGG
Internal bar code:GCCAAGAGCCCCGCACACAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:293
LEAP-Seq percent confirming:5.26316
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGAGGCAGTCATTGGTGT
Suggested primer 2:TTCTTCCAACTTCGCCCCTC