Insertion junction: CLIP2.032719_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.032719
Chromosome:chromosome 13
Location:2749499
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g582201 (1 of 1) PTHR13622//PTHR13622:SF8 - THIAMIN PYROPHOSPHOKINASE // THIAMIN PYROPHOSPHOKINASE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCACAGGCAGTGGCAGGTGGGAGCAGGTGGGAGCGGGCGACCCGCGCTG
Internal bar code:GGAAGCCTATGGACTCATAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1096
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGAAAGAGTGCAATACGG
Suggested primer 2:TGCAAGAACGTAGCCCGAAT