Insertion junction: CLIP2.032722_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.032722
Chromosome:chromosome 13
Location:2274551
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g578550 (1 of 3) IPR000104//IPR011009 - Antifreeze protein, type I // Protein kinase-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGTGATCGACGTGGACATGCACAAGGTGCTGCGCGAGGTTGTCTTCGC
Internal bar code:TGGGTATGCACCGGACCGGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1313
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTTAATAACGCTGCACCG
Suggested primer 2:CTGGGGTACGAGGTGGAGTA