Insertion junction: CLIP2.032738_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.032738
Chromosome:chromosome 2
Location:3707021
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g100450 CYG20 (1 of 5) IPR000104//IPR001054//IPR029787 - Antifreeze protein, type I // Adenylyl cyclase class-3/4/guanylyl cyclase // Nucleotide cyclase; Adenylate/guanylate cyclase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGGAGTGGTACCCGGGTGCACGTACCCGAGTGCAGGTATCGTGTCGAA
Internal bar code:GTCACGGGGGCCAGGTACCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:140
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGATAGCACCCATACACCCC
Suggested primer 2:GTACAAGGCGACGTCATTGC