Insertion junction: CLIP2.032762_5

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032762
Chromosome:chromosome 16
Location:7201972
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676981 (1 of 8) IPR008962 - PapD-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGTGACATGACCAACAATACGGCATGCGCATTTCGTTTCCTTAAAGCA
Internal bar code:TGTAAACAGGTGCCGACTGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3931
LEAP-Seq percent confirming:90.3226
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CGGACATCTCTCAGCTGACC
Suggested primer 2:ACCCGCAAAACCAACATTCG