Insertion junction: CLIP2.032789_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.032789
Chromosome:chromosome 14
Location:3936635
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g632815 (1 of 1) PTHR14614//PTHR14614:SF23 - HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCAGTACAGGAACCAGTCACACGCCTCCGCCCTCACCGCCGGCTGCT
Internal bar code:GCCTGGTAAATTACGGGAAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1316
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGTAGTGAGCTGCGTCCG
Suggested primer 2:CGTGTCTTACTGGCAGTGGT