Insertion junction: CLIP2.032800_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.032800
Chromosome:chromosome 3
Location:3959873
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171250 (1 of 1) IPR000104//IPR011989//IPR012677//IPR013083 - Antifreeze protein, type I // Armadillo-like helical // Nucleotide-binding alpha-beta plait domain // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACCAGCCCAAACTAAACTAAAACCAACGAAAACGAGCGGAGCACAGGC
Internal bar code:TAACGTTTCGGATCGTTTAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:398
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGTGGGAAACGGAGTGG
Suggested primer 2:CACACACACATCCTTGCTGC