Insertion junction: CLIP2.032806_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.032806
Chromosome:chromosome 16
Location:2353754
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659150 (1 of 7) PF00076//PF14259 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCGGAACGCGCCGCGTCGGGCGACGGCGACGGCGACGGTGAGCGGCC
Internal bar code:GATTGATCCGGATTTGGAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2002
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCATCACCATCGCTGT
Suggested primer 2:CGCCTGCTGGGAATACTAGG