Insertion junction: CLIP2.032806_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.032806
Chromosome:chromosome 16
Location:2353757
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659150 (1 of 7) PF00076//PF14259 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCTTGCGCGCCGCCACCGCCGGCCGCTTCTCACTCCGCTGCTTCTCCT
Internal bar code:GATTGATCCGGATTTGGAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:358
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCTGCTGGGAATACTAGG
Suggested primer 2:CCACCATCACCATCGCTGT