Insertion junction: CLIP2.032813_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.032813
Chromosome:chromosome 13
Location:3124415
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g584750 NDUFAF5,SMM46 (1 of 1) K18162 - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5 [EC:2.1.1.-] (NDUFAF5); NADH:ubiquinone oxidoreductase 1 alpha subcomplex assembly factor 5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAGGAACAGCGTGCGCGCGTAGAGGACACTCAGAAGCACGCTAGACCT
Internal bar code:TGAAGTGTTAGTCTAGGGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:879
LEAP-Seq percent confirming:43.75
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGGAACATGTTAGCGCG
Suggested primer 2:AAGAGCGTGGACTGTGAGTG