Insertion junction: CLIP2.032818_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.032818
Chromosome:chromosome 3
Location:6863180
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197700 HLM8 (1 of 1) PTHR13793//PTHR13793:SF100 - PHD FINGER PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE ATX1-RELATED; Histone-lysine N-methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAAGAGATCGCCACGGTGGCGGGTGGGCGCGGCAGCGCGGCTGCTCGC
Internal bar code:TGCGTTTGGGGGTCACGCTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1803
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTTGGCCATCTGAAGCA
Suggested primer 2:GGTAGTTGTTACCCCACCCG